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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015825171.1_cds_XP_016502242.1_15905
CDS Infomation

[gene=LOC107820468] [db_xref=GeneID:107820468] [protein=expansin-like A2] [protein_id=XP_016502242.1] [location=complement(join(5083..5334,5425..5557,6380..6558,6654..6763,6866..6992))] [gbkey=CDS]
Sequence

ATGAAGATTATGGCTGTCAAATTCCTTCCCTTCCTTTTCTTCCTTTTTGTCTCCTCAGCT
ACAGCCTGCGATCGCTGTGTTCACCAATCCAAAGTTGCTTACTTTTCCAGTGCTTCTGCC
CTTCAGTCTGGTGCGTGTGGTTATGGAGATTTAGCAATAGGCTTCAATGGGGGTCGACTT
GCTGCTGCTATTCCTAGCTTTTACAAACAAGGAGCTGGTTGTGGTGCTTGTTATCAGATT
AGATGCAAGGACTCAACACTCTGTTCGAAAGAGGGCACAACTGTAATTGTAACTGATCTA
AATACCAATAACCAAACGGATTTTGTGATCAGTAGCCGAGCTTTTATGGCCATGGCCAAT
AAGGGAAAAGCTAAAGACGTTCTCAAATTGGGAATTGCTGAAGTTGAATATAAAAGAGTA
CCCTGTGATTACAAAAGCAAGAATTTGGCTATTCGCGTGGAAGAATCGAGTCGAAAACCA
AATTATCTAGCAATCAGCTTCTTGTACCAAGGTGGTCAAACTGAAATTGTCGCTGTCGAC
GTAGCTCAGGTTGGATCATCGAGTTGGAATTTCATGAGCCAAAATCACGGAGCAATTTGG
GACACAAGCAGAGTGCCAACAGGGGCATTGCAATTTAGGTTTGTGGTGACAGCAGGGTAC
GATGGCAAATGGAATTGGGCAAAATCAGTGTTGCCAGCAGATTGGAAGAATGGGGTAATT
TATGACACTGGACTTCAGATCACTGACATTGCTCAAGAGGCTTGTTCCCCATGTGATGAT
GGAAACTGGAAACTTCATTAG

Peptide Sequence

PEP ID

XP_016502242.1
PEP Infomation

PREDICTED: expansin-like A2 [Nicotiana tabacum]
Sequence

MKIMAVKFLPFLFFLFVSSATACDRCVHQSKVAYFSSASALQSGACGYGDLAIGFNGGRL
AAAIPSFYKQGAGCGACYQIRCKDSTLCSKEGTTVIVTDLNTNNQTDFVISSRAFMAMAN
KGKAKDVLKLGIAEVEYKRVPCDYKSKNLAIRVEESSRKPNYLAISFLYQGGQTEIVAVD
VAQVGSSSWNFMSQNHGAIWDTSRVPTGALQFRFVVTAGYDGKWNWAKSVLPADWKNGVI
YDTGLQITDIAQEACSPCDDGNWKLH

Transcript Sequence

Gene sequence data has not been registered.